Helping people make sense of Huntington's disease.
An open HD research hub for families, learners, and researchers. See what is changing, understand why it matters, and ask questions against the actual papers and trials.
We are data scientists, not doctors. This is a research and education tool. For care decisions, please reach out to HDSA, HDBuzz, HDYO, or your own neurologist.
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Jump straight to the newest HD news, trial updates, and papers.
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Curious about Huntington's? Start with the basics.
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menu_book Papers (PubMed)
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draft Preprints (biorxiv + medrxiv)
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newspaper HD news (HDBuzz)AMT-130 at Four Years: Hopeful Signs, Complex Controls via data_fetcher
26 experiments. Methods, findings and limitations.
Every tracked effort is an experiment: a hypothesis, a method, a result, and a published log. The cards below are the latest complete version of each one. Older runs stay in the audit trail and are marked superseded.
First-look LLM triage: 22 HD abstracts
The model analyzed 20 of 22 abstracts and surfaced recurring themes in huntingtin modifications, biomarkers and genetic mechanisms. These are exploratory literature signals, not clinical findings.
Full-text analysis of 16 HD research papers
The synthesis highlighted LIG1 repair fidelity, genetic interventions and mitochondrial-inflammatory connections. Proposed links remain model-generated hypotheses rather than established treatment effects.
Gemma 4 analysis of the 16-paper corpus
Gemma proposed connections among protein aggregation, mitochondrial dysfunction, inflammation and metabolic regulation. This second Experiment 3 publication offers another model's interpretation, not a validated ranking against Llama.
Expanded corpus: genetic and metabolic hypotheses
The report proposes a two-track framing of genetic damage alongside metabolic and immune dysfunction, highlighting copper homeostasis and gut-brain research as topics for further investigation.
June 2026 literature update
The synthesis highlighted membrane lipid interactions, UCHL3-related proteostasis and DNA-repair or epigenetic pathways. These signals motivated subsequent focused literature experiments.
Lipid disruption and protein clearance in HD
The model favored a lipid-first hypothesis connecting membrane organization, mitochondrial stress and protein clearance. The proposed order is a research question, not demonstrated causality.
TET1 and epigenetic regulation in HD
The model proposed TET1 suppression as a contributing factor that may interact with lipid and proteostasis pathways. Candidate compounds in the report are hypotheses for research, not evidence of benefit or safety in people.
Gut-brain and neuronal excitability hypotheses
The report proposes links among gut barrier function, systemic metabolism and neuronal pathways. It draws on Parkinson's disease analogies, which do not establish that HD begins in the gut.
NAD+ metabolism and mitochondrial research
The model highlighted NAD+ metabolism as a research direction and proposed precursor, PARP and sirtuin-related hypotheses. The report does not demonstrate that any candidate improves outcomes in HD.
A footwear concept for chorea-related instability
The October 7 concept revision starts at an illustrative 115 mm width, with the archived 174 mm width available separately. Broad straps, pull loops, open fastening and heel/forefoot cells remain untested design choices. Neither width is a fit recommendation. The archived 83% is a model ratio, not a measured benefit. No tested shoe or suitable personal dimensions have been established.
Qwen comparison: the saved run timed out
All 16 paper analyses and the cross-paper synthesis failed with an Ollama read timeout at localhost:11434. The file records input size only. No Qwen finding was produced.
Somatic CAG screen transcribed from the saved Gemma synthesis
The saved synthesis ranks MSH3, PMS1 and FAN1 and records 68 parsed analyses plus 7 JSON parse failures. Those ranks are the model's assessment, not a new measurement.
HDinHD access probe: no public catalog
Explorer redirects to a login page. The probe saved zero catalog rows. A normalizer and a synthetic fixture exist for when HDINHD_TOKEN is available.
Paper corpus catch-up after the May 5 stall
The scout corpus had stopped on 2026-05-05 at 86 papers while data_fetcher kept refreshing homepage papers. Discover-only search raised the corpus to 156 papers and analyzed none, because no LLM is configured.
Kynurenine Pathway Dysregulation in HD — KMO, IDO1, and QUIN/KYNA Imbalance
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
Complement Cascade & Neuroinflammation in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
Cognitive Pharmacotherapy in Huntington's Disease
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
SEMA4D Neuroinflammation Axis in Huntington's Disease
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
Mitochondrial Membrane Stabilization in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
PDE10A Inhibitors — Striatal cAMP/cGMP Rescue in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
GLP-1R Agonists — Neuroprotection Repurposing for HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
MPC Inhibition & ISR Normalization in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
Ferroptosis & Iron Chelation in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
cGAS-STING Innate Immune Pathway in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
Adenosine A2A Receptor Antagonism for HD MSN Protection
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
Thiamine + Biotin TCA Cycle Rescue in HD
The script was not run. No papers were fetched and no model output was produced. This page is the finished account of that block.
What the shoe-building note actually connects to
The only HD shoe work found is Experiment #11, an unbuilt design study merged in PR 282. Named factories are capability examples, not partners. Other shoe hits in Ravi's repos are unrelated.
Superseded runs (kept for the audit trail, not featured)
Pick a topic. Read what it means. Then do something with it.
Huntingtin-lowering (ASOs and gene therapy)
Picture the huntingtin protein as a faulty thermostat that someone left turned up too high. Huntingtin-lowering programs try to turn the dial back down, so the brain has less of the harmful version to deal with in the first place.
A family of treatments that tries to make the brain produce less of the huntingtin protein. Some are repeat injections, some are a one-time gene therapy.
Snapshot recorded: October 04, 2026 at 05:35 PM (timezone not recorded). Refreshes scheduled daily; source results below.
PubMed: Refresh succeeded. Last successful refresh: October 04, 2026 at 05:35 PM (timezone not recorded). Last attempt: October 04, 2026 at 05:35 PM (timezone not recorded).
ClinicalTrials.gov: Refresh succeeded. Last successful refresh: October 04, 2026 at 05:35 PM (timezone not recorded). Last attempt: October 04, 2026 at 05:35 PM (timezone not recorded).
HDBuzz: Refresh succeeded. Last successful refresh: October 04, 2026 at 05:35 PM (timezone not recorded). Last attempt: October 04, 2026 at 05:35 PM (timezone not recorded).
Open Targets: Refresh succeeded. Last successful refresh: October 04, 2026 at 05:35 PM (timezone not recorded). Last attempt: October 04, 2026 at 05:35 PM (timezone not recorded).
HD News + Breakthroughs
AMT-130 at Four Years: Hopeful Signs, Complex Controls
September 2026: This month in Huntington’s disease research
Studying Stutters: What 900,000 genomes teach us about growing DNA repeats
Highlighting Mental Health Disparities in Indigenous Communities Affected by Huntington’s Disease
Encouraging news from Skyhawk, as SKY-0515 Phase 1/2 data continues to hold promise
Latest Research Papers
The HTT1a protein initiates HTT aggregation in a knock-in mouse model of Huntington's disease.
The mutation that causes Huntington's disease is a CAG repeat expansion in exon 1 of the huntingtin gene (HTT) that leads to an abnormally long polyglutamine tract in the huntingtin protein (HTT). Mut
PubMed open_in_newUncovering hidden protein networks in Huntington's disease: implications for pathogenesis and therap
Huntington's Disease is a neurodegenerative disorder that progresses over time and can be passed down from parent to child. In uncontrolled motor activities, behavioural problems come into play, as we
PubMed open_in_newHuntingtin Aggregate-Responsive Autophagy Gene Circuit Mitigates Disease Pathology in R6/2 Mice.
The accumulation of mutant huntingtin (mHTT) aggregates drives the pathology of Huntington's disease (HD), yet therapies capable of distinguishing toxic species from wild-type proteins remain elusive.
PubMed open_in_newFluid and Imaging Biomarkers in Huntington's Disease.
Growing interest in earlier and mechanism-targeted interventions for Huntington's disease (HD) has brought focus on biomarkers capable of informing trial design and regulatory pathways. This review di
PubMed open_in_newChaperone-mediated remodelling of mutant huntingtin.
Huntington's disease is caused by the trinucleotide repeat CAG expansion in the huntingtin gene, resulting in an N-terminal polyglutamine (polyQ) tract that renders the huntingtin protein (HTT) prone
PubMed open_in_newmiR-196a reduces mutant Huntingtin aggregates by Rad23b-mediated degradation in Huntington's disease
Huntington's disease (HD) is a neurodegenerative disorder caused by abnormal expansions of poly-glutamine repeats in the mutant Huntingtin (mHTT). The expanded proteins form pathological aggregates to
PubMed open_in_newActive Clinical Trials
30 tracked studies, 95 recorded as actual enrollment, 110,329 recorded as estimated enrollment, 23 recruiting now. These figures are the sum of the ClinicalTrials.gov enrollment fields in this table, not a count of unique patients.
| NCT ID | Title | Sponsor | Phase | Status | Enrollment | Enrollment type | Intervention |
|---|---|---|---|---|---|---|---|
| NCT07609108 | Pridopidine Phase 3 Study in Huntington's Disease | Prilenia | PHASE3 | Recruiting | 400 | Estimated | Pridopidine; Placebo |
| NCT05541627 | A Study to Evaluate AB-1001 Striatal Administratio | AskBio France, SAS, a sub | PHASE1, PHASE2 | Active Not Recruiting | 5 | Actual | AB-1001 Gene Therapy |
| NCT06626412 | Longitudinal SV2A PET and MRI in Premanifest HD | Universitaire Ziekenhuize | NA | Active Not Recruiting | 40 | Estimated | Diagnostic Test: 18F-SynVesT-1 PET; Volu |
| NCT07378644 | Study to Evaluate the Pharmacodynamics, Safety and | Skyhawk Therapeutics, Inc | PHASE2, PHASE3 | Recruiting | 400 | Estimated | SKY-0515; SKY-0515 Placebo |
| NCT06312189 | Long-term Study to Evaluate Safety and Tolerabilit | Neurocrine Biosciences | PHASE3 | Enrolling By Invitation | 7 | Estimated | Valbenazine |
| NCT06626308 | Early Biomarkers in Premanifest Huntington's Disea | University Hospital, Gren | NA | Recruiting | 20 | Estimated | brain functional MRI |
| NCT06843252 | Home-based TDCS (Transcranial Direct Current Stimu | The University of Texas H | NA | Recruiting | 16 | Estimated | Transcranial direct current stimulation |
| NCT07503743 | Biology-Driven Cognitive Profiling in Huntington's | Fundació Institut de Rece | N/A | Active Not Recruiting | 90 | Actual | |
| NCT06828471 | Social Cognition Training in Individuals With Hunt | Rush University Medical C | NA | Recruiting | 20 | Estimated | Social Cognition Training |
| NCT01574053 | Enroll -HD: A Prospective Registry Study in a Glob | CHDI Foundation, Inc. | N/A | Recruiting | 35,000 | Estimated | |
| NCT07253038 | Evaluation of Three Tests to Assess Social Cogniti | Region Skane | N/A | Recruiting | 40 | Estimated | |
| NCT02994719 | Gait Analysis in Neurological Disease | Beth Israel Deaconess Med | N/A | Active Not Recruiting | 120 | Estimated | Anti-Parkinson medication; Deep Brain St |
| NCT00874783 | Development of IPS from Donated Somatic Cells of P | Hadassah Medical Organiza | N/A | Recruiting | 120 | Estimated | |
| NCT06873334 | Study of SKY-0515 for Safety, Efficacy, and Pharma | Skyhawk Therapeutics, Inc | PHASE2, PHASE3 | Active Not Recruiting | 120 | Estimated | SKY-0515; SKY-0515 Placebo |
| NCT06147414 | Development of Non-Invasive Prenatal Diagnosis for | Assistance Publique - Hôp | N/A | Recruiting | 550 | Estimated | Blood sample |
| NCT06203106 | NYSCF Scientific Discovery Biobank | New York Stem Cell Founda | N/A | Recruiting | 10,000 | Estimated | Biological Sample Collection |
| NCT07536061 | A First-in-human Study of the Effects of SRP-1005 | Sarepta Therapeutics, Inc | PHASE1 | Recruiting | 32 | Estimated | SRP-1005; Placebo |
| NCT07451613 | Safety and Tolerability Study of Human Neural Stem | Leslie Thompson | PHASE1, PHASE2 | Recruiting | 21 | Estimated | hNSC-01 |
| NCT07010705 | Digital Measures for Clinical Trial Endpoints in H | University of Rochester | N/A | Recruiting | 100 | Estimated | ActiGraph LEAP; Axivity AX6 |
| NCT06209515 | Sociodemographic Factors and Criminal Behaviour Pr | Kuopio University Hospita | N/A | Active Not Recruiting | 61,292 | Estimated | |
| NCT06774443 | Hinting Task for Huntington's Disease | University Medical Center | N/A | Recruiting | 52 | Estimated | Neuropsychological assessment |
| NCT04012411 | Study of BDNF Pathway Biomarkers in the Cerebrospi | University Hospital, Mont | NA | Recruiting | 135 | Estimated | Brain MRI; Lumbar Punction; Blood sample |
| NCT05822908 | A Safety and Pharmacokinetics Trial of VO659 in SC | Vico Therapeutics B. V. | PHASE1, PHASE2 | Recruiting | 68 | Estimated | VO659 |
| NCT06782230 | ScATtEred Rare Disease Biobanks: a Model of Sample | IRCCS Policlinico S. Dona | N/A | Recruiting | 800 | Estimated | |
| NCT06634628 | iMagemHTT-009- FIH Evaluation of Novel Mutant Hunt | CHDI Foundation, Inc. | EARLY_PHASE1 | Recruiting | 27 | Estimated | Radioligand [11C]CHDI-00491009 |
| NCT06448546 | Gut Microbiomes in HD | University of Central Flo | N/A | Recruiting | 36 | Estimated | |
| NCT06826612 | A Randomized Study of SPK-10001 Gene Therapy in Pa | Hoffmann-La Roche | PHASE1, PHASE2 | Recruiting | 53 | Estimated | SPK-10001; Placebo Surgery Control |
| NCT07326709 | A Study to Investigate the Efficacy, Safety and To | Novartis Pharmaceuticals | PHASE3 | Recruiting | 770 | Estimated | Votoplam (blinded); Placebo |
| NCT06585449 | A Study to Evaluate ALN-HTT02 in Adult Patients Wi | Alnylam Pharmaceuticals | PHASE1 | Recruiting | 66 | Estimated | ALN-HTT02; Placebo |
| NCT07513844 | Optimizing Parameters of Low-Intensity Focused Ult | First Affiliated Hospital | NA | Recruiting | 24 | Estimated | Low-Intensity Focused Ultrasound Stimula |
Published Research Ideas
AI-assisted repurposing ideas with explicit uncertainty. These are starting points for review, not recommendations or validated findings.
Read Experiment #1: Full Analysis arrow_forwardNew June 2026 knock-in pig study (PMID 42322611): mHTT disrupts TBP binding to the TET1 promoter, silencing TET1 transcription before symptom onset. TET1 converts 5mC to 5hmC (DNA demethylation); its loss causes aberrant
Oligomer inhibitor shown to ameliorate HD pathology in mouse and cellular models. Exp 6 signal: mHTT hijacks neuronal lipid rafts; anle138b stabilizes oligomer conformation before raft association. Preclinical confidence
Exp 7 identified CYP46A1 activation as the highest-confidence early intervention: restoring cholesterol catabolism may stabilize lipid raft microdomains disrupted by mHTT, preventing the downstream proteostasis cascade.
New June 2026 paper: selectively targeting HTT1a isoform provides superior molecular rescue vs. lowering canonical HTT. HTT1a is enriched in disease-vulnerable neurons. Isoform-selective lowering preserves full-length HT
HDBuzz Jun 25 2026: PROTACs act as molecular glue, recruiting E3 ubiquitin ligases to tag mutant huntingtin (mHTT) for proteasomal destruction while leaving wild-type HTT intact. Unlike ASOs/siRNA (which lower all HTT mR
New June 2026 paper: somatic CRISPR knockout of Msh3 mitigates HD pathology in mice. Msh3 drives somatic CAG repeat expansion in neurons — without it, the repeat stays stable. This is a one-time intervention that targets
Important: These hypotheses are triage artifacts, not evidence of efficacy. They have not been clinically validated, experimentally confirmed, or expert-reviewed unless explicitly stated.
These cards are generated from data/hypotheses_tracker.json, not hand-picked homepage copy. Are you an HD researcher? We'd love your feedback. Review and discuss on GitHub
Who This Is For
This is best viewed as open research infrastructure: a place where data scientists, AI engineers, bioinformaticians, and researchers can test whether agent workflows actually help with literature review, hypothesis triage, and research communication.
Run our autonomous research agents. Fork the repo. Try different models. Add experiments. This is open-source infrastructure you can build on.
Review our AI-generated hypotheses. Spot what's promising and what's wrong. Your expertise is what turns computational ideas into real science. Join the discussion.
Want to learn how AI applies to drug discovery? Read our experiment reports — we show every step, what worked, and what didn't. No PhD required to follow along.
Resources for Patients, Families + Researchers
These organizations are the real experts. We link to them because they do essential work.
Huntington's Disease Society of America. Find local support groups, social workers, Centers of Excellence. The primary advocacy organization in the US.
Scientists explain HD research in words everyone can understand. The best place to follow new developments without needing a PhD.
Huntington's Disease Youth Organization. Resources specifically for young people affected by HD — teens, young adults, and young families.
The world's largest observational study for HD families. Your data helps researchers understand HD and design better clinical trials.
EHDN coordinates HD research across Europe. Clinical trials, registries, and working groups advancing the science globally.
Evidence-based rehabilitation exercises designed for people with HD. Physical therapy, speech therapy, and occupational therapy resources.
Ways to Get Involved
Whether you're a patient, family member, researcher, developer, or just someone who cares.
Join a Clinical Trial
23 HD trials are actively recruiting right now. Your participation directly accelerates the path to treatment.
Find recruiting trials open_in_newContribute to Open Source
Our research agent, literature scanner, and drug repurposing tools are all open source. Data scientists, ML engineers, and bioinformaticians welcome.
View on GitHub open_in_newShare Your Story
Patient and family stories drive awareness and funding. Share your experience with HDSA or on social media to help others feel less alone.
HDSA Get Involved open_in_newDonate
Research funding saves lives. HDSA and CHDI Foundation fund the science that makes breakthroughs like AMT-130 possible.
Donate to HDSA open_in_newShare Feedback or Ideas
Are you an HD researcher? See something interesting in our hypotheses? Spot an error? We want to hear from you — every correction makes this better.
Join the Discussion open_in_new